IL_6ZCE_098
3D structure
- PDB id
- 6ZCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 43S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- GUGC*GUUAUC
- Length
- 10 nucleotides
- Bulged bases
- 6ZCE|1|A|U|1370, 6ZCE|1|A|A|1371
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZCE_098 not in the Motif Atlas
- Homologous match to IL_8P9A_446
- Geometric discrepancy: 0.4391
- The information below is about IL_8P9A_446
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZCE|1|A|G|1352
6ZCE|1|A|U|1353
6ZCE|1|A|G|1354
6ZCE|1|A|C|1355
*
6ZCE|1|A|G|1368
6ZCE|1|A|U|1369
6ZCE|1|A|U|1370
6ZCE|1|A|A|1371
6ZCE|1|A|U|1372
6ZCE|1|A|C|1373
Current chains
- Chain A
- 18S ribosomal RNA (1719-MER)
Nearby chains
- Chain R
- 40S ribosomal protein S16-A
- Chain U
- 40S ribosomal protein S19-A
- Chain V
- 40S ribosomal protein S20
Coloring options: