IL_6ZDP_002

3D structure

PDB id

6ZDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of telomerase from Candida Tropicalis in complexe with TWJ fragment of telomeric RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.85 Å

Loop

Sequence

GACUUC*GUUUGUC

Length

13 nucleotides

Bulged bases

6ZDP|1|B|U|1316

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Tandem non-canonical cWW pairs with near WC pairs

Broad Annotation

Tandem non-canonical cWW pairs with near WC pairs

Motif group

IL_76308.4

Basepair signature

cWW-tSH-tHW-L-R-cWW-cWW

Number of instances in this motif group

6

Unit IDs

6ZDP|1|B|G|1297
6ZDP|1|B|A|1298
6ZDP|1|B|C|1299
6ZDP|1|B|U|1300
6ZDP|1|B|U|1301
6ZDP|1|B|C|1302
*
6ZDP|1|B|G|1313
6ZDP|1|B|U|1314
6ZDP|1|B|U|1315
6ZDP|1|B|U|1316
6ZDP|1|B|G|1317
6ZDP|1|B|U|1318
6ZDP|1|B|C|1321

Current chains

Chain B

Chains: B

Nearby chains

Chain A

Telomerase reverse transcriptase