IL_6ZJ3_288
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 6ZJ3|1|S1|C|2140, 6ZJ3|1|S1|A|2272
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZJ3_288 not in the Motif Atlas
- Homologous match to IL_4V88_463
- Geometric discrepancy: 0.1272
- The information below is about IL_4V88_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6ZJ3|1|S1|C|2139
6ZJ3|1|S1|C|2140
6ZJ3|1|S1|G|2141
*
6ZJ3|1|S1|C|2270
6ZJ3|1|S1|A|2271
6ZJ3|1|S1|A|2272
6ZJ3|1|S1|G|2273
Current chains
- Chain S1
- 18S rRNA
Nearby chains
- Chain L3
- Ribosomal protein eL41
- Chain S3
- Transfer RNA; tRNA
- Chain S5
- A-site tRNA
- Chain Sb
- Ribosomal protein eS26
Coloring options: