IL_6ZJ3_311
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- (OMC)GG(OMU)AA*UGAAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMC, OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZJ3|1|LE|OMC|1312
6ZJ3|1|LE|G|1313
6ZJ3|1|LE|G|1314
6ZJ3|1|LE|OMU|1315
6ZJ3|1|LE|A|1316
6ZJ3|1|LE|A|1317
*
6ZJ3|1|LE|U|1376
6ZJ3|1|LE|G|1377
6ZJ3|1|LE|A|1378
6ZJ3|1|LE|A|1379
6ZJ3|1|LE|U|1380
6ZJ3|1|LE|G|1381
Current chains
- Chain LE
- LSU rRNA chain 4
Nearby chains
- Chain L7
- Ribosomal protein eLEgr3
- Chain LF
- Large subunit ribosomal RNA; LSU rRNA
- Chain LI
- Large subunit ribosomal RNA; LSU rRNA
- Chain LO
- 5S ribosomal RNA; 5S rRNA
- Chain Lc
- 60S ribosomal protein L10
- Chain Lh
- Ribosomal protein eL21
- Chain Lr
- Ribosomal protein uL30
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