IL_6ZJ3_362
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- ACUGGGA(OMU)UG*CUUGAUCU
- Length
- 18 nucleotides
- Bulged bases
- 6ZJ3|1|S1|G|1638
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZJ3_362 not in the Motif Atlas
- Homologous match to IL_8P9A_470
- Geometric discrepancy: 0.284
- The information below is about IL_8P9A_470
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28304.1
- Basepair signature
- cWW-R-L-R-L-R-L-R-L-L-L-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
6ZJ3|1|S1|A|1634
6ZJ3|1|S1|C|1635
6ZJ3|1|S1|U|1636
6ZJ3|1|S1|G|1637
6ZJ3|1|S1|G|1638
6ZJ3|1|S1|G|1639
6ZJ3|1|S1|A|1640
6ZJ3|1|S1|OMU|1641
6ZJ3|1|S1|U|1642
6ZJ3|1|S1|G|1643
*
6ZJ3|1|S1|C|1662
6ZJ3|1|S1|U|1663
6ZJ3|1|S1|U|1664
6ZJ3|1|S1|G|1665
6ZJ3|1|S1|A|1666
6ZJ3|1|S1|U|1667
6ZJ3|1|S1|C|1668
6ZJ3|1|S1|U|1669
Current chains
- Chain S1
- 18S rRNA
Nearby chains
- Chain SN
- Ribosomal protein eS10
- Chain SQ
- Ribosomal protein eS12
- Chain SS
- Ribosomal protein uS14
- Chain Sf
- Ribosomal protein eS31
Coloring options: