3D structure

PDB id
6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
Experimental method
ELECTRON MICROSCOPY
Resolution
2.89 Å

Loop

Sequence
CUAAACC*GAUGAAAAAUUAUAACCAAG
Length
27 nucleotides
Bulged bases
6ZM5|1|A|A|1804, 6ZM5|1|A|U|1807
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ZM5|1|A|C|1672
6ZM5|1|A|U|1673
6ZM5|1|A|A|1674
6ZM5|1|A|A|1675
6ZM5|1|A|A|1676
6ZM5|1|A|C|1677
6ZM5|1|A|C|1678
*
6ZM5|1|A|G|1797
6ZM5|1|A|A|1798
6ZM5|1|A|U|1799
6ZM5|1|A|G|1800
6ZM5|1|A|A|1801
6ZM5|1|A|A|1802
6ZM5|1|A|A|1803
6ZM5|1|A|A|1804
6ZM5|1|A|A|1805
6ZM5|1|A|U|1806
6ZM5|1|A|U|1807
6ZM5|1|A|A|1808
6ZM5|1|A|U|1809
6ZM5|1|A|A|1810
6ZM5|1|A|A|1811
6ZM5|1|A|C|1812
6ZM5|1|A|C|1813
6ZM5|1|A|A|1814
6ZM5|1|A|A|1815
6ZM5|1|A|G|1816

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 0
39S ribosomal protein L32, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain T
39S ribosomal protein L22, mitochondrial
Chain V
39S ribosomal protein L24, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain d
39S ribosomal protein L45, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial
Chain v
Nascent polypeptide

Coloring options:

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