IL_6ZM5_029

3D structure

PDB id

6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

6ZM5|1|A|A|2644

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZM5_029 not in the Motif Atlas

Homologous match to IL_5J7L_312

Geometric discrepancy: 0.1412

The information below is about IL_5J7L_312

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

6ZM5|1|A|C|2490
6ZM5|1|A|C|2491
*
6ZM5|1|A|G|2643
6ZM5|1|A|A|2644
6ZM5|1|A|G|2645

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains