IL_6ZM5_056
3D structure
- PDB id
- 6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- CA*UUUG
- Length
- 6 nucleotides
- Bulged bases
- 6ZM5|1|A|U|3228, 6ZM5|1|A|U|3229
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZM5_056 not in the Motif Atlas
- Geometric match to IL_5WTK_001
- Geometric discrepancy: 0.1693
- The information below is about IL_5WTK_001
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_71421.3
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
6ZM5|1|A|C|3212
6ZM5|1|A|A|3213
*
6ZM5|1|A|U|3227
6ZM5|1|A|U|3228
6ZM5|1|A|U|3229
6ZM5|1|A|G|3230
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 0
- 39S ribosomal protein L32, mitochondrial
- Chain 7
- 39S ribosomal protein L39, mitochondrial
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain O
- 39S ribosomal protein L17, mitochondrial
Coloring options: