IL_6ZM5_092
3D structure
- PDB id
- 6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- CAAA*UAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZM5_092 not in the Motif Atlas
- Geometric match to IL_1SAQ_002
- Geometric discrepancy: 0.1542
- The information below is about IL_1SAQ_002
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.13
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
6ZM5|1|AA|C|1274
6ZM5|1|AA|A|1275
6ZM5|1|AA|A|1276
6ZM5|1|AA|A|1277
*
6ZM5|1|AA|U|1298
6ZM5|1|AA|A|1299
6ZM5|1|AA|A|1300
6ZM5|1|AA|G|1301
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A1
- 28S ribosomal protein S35, mitochondrial
- Chain AB
- 28S ribosomal protein S2, mitochondrial
- Chain AC
- 28S ribosomal protein S24, mitochondrial
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AG
- 28S ribosomal protein S9, mitochondrial
Coloring options: