3D structure

PDB id
6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
Experimental method
ELECTRON MICROSCOPY
Resolution
2.89 Å

Loop

Sequence
AUCUACAAUCAACCAAC*GUCAUU
Length
23 nucleotides
Bulged bases
6ZM5|1|A|C|2393, 6ZM5|1|A|A|2406
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ZM5|1|A|A|2384
6ZM5|1|A|U|2385
6ZM5|1|A|C|2386
6ZM5|1|A|U|2387
6ZM5|1|A|A|2388
6ZM5|1|A|C|2389
6ZM5|1|A|A|2390
6ZM5|1|A|A|2391
6ZM5|1|A|U|2392
6ZM5|1|A|C|2393
6ZM5|1|A|A|2394
6ZM5|1|A|A|2395
6ZM5|1|A|C|2396
6ZM5|1|A|C|2397
6ZM5|1|A|A|2398
6ZM5|1|A|A|2399
6ZM5|1|A|C|2400
*
6ZM5|1|A|G|2403
6ZM5|1|A|U|2404
6ZM5|1|A|C|2405
6ZM5|1|A|A|2406
6ZM5|1|A|U|2407
6ZM5|1|A|U|2408

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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