IL_6ZM6_065
3D structure
- PDB id
- 6ZM6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GCAC*GC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZM6_065 not in the Motif Atlas
- Geometric match to IL_1NTA_003
- Geometric discrepancy: 0.2282
- The information below is about IL_1NTA_003
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_74641.3
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 36
Unit IDs
6ZM6|1|AA|G|762
6ZM6|1|AA|C|763
6ZM6|1|AA|A|764
6ZM6|1|AA|C|765
*
6ZM6|1|AA|G|777
6ZM6|1|AA|C|778
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A0
- 28S ribosomal protein S34, mitochondrial
- Chain A3
- Aurora kinase A-interacting protein
- Chain AL
- 28S ribosomal protein S15, mitochondrial
- Chain AN
- 28S ribosomal protein S17, mitochondrial
Coloring options: