IL_6ZM7_024

3D structure

PDB id

6ZM7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

6ZM7|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZM7|1|L5|A|466
6ZM7|1|L5|U|467
6ZM7|1|L5|U|468
6ZM7|1|L5|C|469
6ZM7|1|L5|A|470
6ZM7|1|L5|A|471
6ZM7|1|L5|C|472
*
6ZM7|1|L5|G|682
6ZM7|1|L5|C|683
6ZM7|1|L5|G|684
6ZM7|1|L5|C|685
6ZM7|1|L5|A|686
6ZM7|1|L5|U|687
6ZM7|1|L5|U|688
6ZM7|1|L5|U|689

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Lr

60S ribosomal protein L28