IL_6ZME_024

3D structure

PDB id

6ZME (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

6ZME|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZME|1|L5|A|466
6ZME|1|L5|U|467
6ZME|1|L5|U|468
6ZME|1|L5|C|469
6ZME|1|L5|A|470
6ZME|1|L5|A|471
6ZME|1|L5|C|472
*
6ZME|1|L5|G|682
6ZME|1|L5|C|683
6ZME|1|L5|G|684
6ZME|1|L5|C|685
6ZME|1|L5|A|686
6ZME|1|L5|U|687
6ZME|1|L5|U|688
6ZME|1|L5|U|689

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Lr

60S ribosomal protein L28