IL_6ZMT_040
3D structure
- PDB id
- 6ZMT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UCUC*GAA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZMT_040 not in the Motif Atlas
- Geometric match to IL_4N0T_004
- Geometric discrepancy: 0.3633
- The information below is about IL_4N0T_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32983.1
- Basepair signature
- cWW-L-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
6ZMT|1|2|U|747
6ZMT|1|2|C|748
6ZMT|1|2|U|749
6ZMT|1|2|C|750
*
6ZMT|1|2|G|793
6ZMT|1|2|A|794
6ZMT|1|2|A|795
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain E
- 40S ribosomal protein S4, X isoform
- Chain H
- 40S ribosomal protein S7
Coloring options: