IL_6ZQB_110

3D structure

PDB id

6ZQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state B2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

AA*UGUUUAAU

Length

10 nucleotides

Bulged bases

6ZQB|1|D2|G|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZQB|1|D2|A|94
6ZQB|1|D2|A|95
*
6ZQB|1|D2|U|149
6ZQB|1|D2|G|150
6ZQB|1|D2|U|151
6ZQB|1|D2|U|152
6ZQB|1|D2|U|153
6ZQB|1|D2|A|154
6ZQB|1|D2|A|155
6ZQB|1|D2|U|156

Current chains

Chain D2

5ETS RNA

Nearby chains

Chain UE

U3 small nucleolar RNA-associated protein 5

Chain UO

U3 small nucleolar RNA-associated protein 15

Chain UQ

NET1-associated nuclear protein 1