IL_6ZQE_040

3D structure

PDB id

6ZQE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-A (Poly-Ala)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.1 Å

Loop

Sequence

GGCCGGUC*GGAUUUCC

Length

16 nucleotides

Bulged bases

6ZQE|1|D3|G|656, 6ZQE|1|D3|U|657

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZQE|1|D3|G|651
6ZQE|1|D3|G|652
6ZQE|1|D3|C|653
6ZQE|1|D3|C|654
6ZQE|1|D3|G|655
6ZQE|1|D3|G|656
6ZQE|1|D3|U|657
6ZQE|1|D3|C|658
*
6ZQE|1|D3|G|676
6ZQE|1|D3|G|677
6ZQE|1|D3|A|678
6ZQE|1|D3|U|679
6ZQE|1|D3|U|680
6ZQE|1|D3|U|681
6ZQE|1|D3|C|682
6ZQE|1|D3|C|683

Current chains

Chain D3

18S rRNA

Nearby chains

Chain CH

Ribosomal RNA-processing protein 9