IL_6ZQF_037

3D structure

PDB id

6ZQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-B (Poly-Ala)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.9 Å

Loop

Sequence

ACGUUUGG*CCAUCGU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZQF|1|D3|A|817
6ZQF|1|D3|C|818
6ZQF|1|D3|G|819
6ZQF|1|D3|U|820
6ZQF|1|D3|U|821
6ZQF|1|D3|U|822
6ZQF|1|D3|G|823
6ZQF|1|D3|G|824
*
6ZQF|1|D3|C|848
6ZQF|1|D3|C|849
6ZQF|1|D3|A|850
6ZQF|1|D3|U|851
6ZQF|1|D3|C|852
6ZQF|1|D3|G|853
6ZQF|1|D3|U|854

Current chains

Chain D3

18S rRNA

Nearby chains

Chain DH

40S ribosomal protein S7-A