IL_6ZQG_063
3D structure
- PDB id
- 6ZQG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUUGG*CUUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZQG_063 not in the Motif Atlas
- Geometric match to IL_3IGI_009
- Geometric discrepancy: 0.3875
- The information below is about IL_3IGI_009
- Detailed Annotation
- UAA/GAN related
- Broad Annotation
- No text annotation
- Motif group
- IL_77691.7
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
6ZQG|1|D3|C|1495
6ZQG|1|D3|U|1496
6ZQG|1|D3|U|1497
6ZQG|1|D3|G|1498
6ZQG|1|D3|G|1499
*
6ZQG|1|D3|C|1509
6ZQG|1|D3|U|1510
6ZQG|1|D3|U|1511
6ZQG|1|D3|G|1512
Current chains
- Chain D3
- 18S rRNA
Nearby chains
- Chain DT
- 40S ribosomal protein S19-A
Coloring options: