IL_6ZS9_005

3D structure

PDB id

6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with ribosome recycling factor

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CAU*AG

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZS9_005 not in the Motif Atlas

Homologous match to IL_4LFB_004

Geometric discrepancy: 0.1859

The information below is about IL_4LFB_004

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.1

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

58

Unit IDs

6ZS9|1|AA|C|694
6ZS9|1|AA|A|695
6ZS9|1|AA|U|696
*
6ZS9|1|AA|A|819
6ZS9|1|AA|G|820

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AU

28S ribosomal protein S26, mitochondrial