IL_6ZS9_092

3D structure

PDB id

6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with ribosome recycling factor

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UG*UGA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZS9_092 not in the Motif Atlas

Homologous match to IL_7RQB_096

Geometric discrepancy: 0.191

The information below is about IL_7RQB_096

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_76223.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

10

Unit IDs

6ZS9|1|XA|U|2994
6ZS9|1|XA|G|2995
*
6ZS9|1|XA|U|3067
6ZS9|1|XA|G|3068
6ZS9|1|XA|A|3069

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XE

39S ribosomal protein L3, mitochondrial