IL_6ZSA_008
3D structure
- PDB id
- 6ZSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CAUCAA*UCAAAACG
- Length
- 14 nucleotides
- Bulged bases
- 6ZSA|1|AA|U|758, 6ZSA|1|AA|A|782
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZSA_008 not in the Motif Atlas
- Geometric match to IL_6CZR_123
- Geometric discrepancy: 0.1518
- The information below is about IL_6CZR_123
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_46174.2
- Basepair signature
- cWW-cSS-tSS-tSH-L-cWW-tHW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6ZSA|1|AA|C|756
6ZSA|1|AA|A|757
6ZSA|1|AA|U|758
6ZSA|1|AA|C|759
6ZSA|1|AA|A|760
6ZSA|1|AA|A|761
*
6ZSA|1|AA|U|779
6ZSA|1|AA|C|780
6ZSA|1|AA|A|781
6ZSA|1|AA|A|782
6ZSA|1|AA|A|783
6ZSA|1|AA|A|784
6ZSA|1|AA|C|785
6ZSA|1|AA|G|786
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain A3
- Aurora kinase A-interacting protein
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain AL
- 28S ribosomal protein S15, mitochondrial
- Chain AN
- 28S ribosomal protein S17, mitochondrial
Coloring options: