3D structure

PDB id
6ZSC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome in complex with E-site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CUU*ACUG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ZSC_061 not in the Motif Atlas
Geometric match to IL_4N0T_004
Geometric discrepancy: 0.3069
The information below is about IL_4N0T_004
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_32983.2
Basepair signature
cWW-L-R-L-cWW
Number of instances in this motif group
8

Unit IDs

6ZSC|1|XA|C|2046
6ZSC|1|XA|U|2047
6ZSC|1|XA|U|2048
*
6ZSC|1|XA|A|2091
6ZSC|1|XA|C|2092
6ZSC|1|XA|U|2093
6ZSC|1|XA|G|2094

Current chains

Chain XA
16S rRNA

Nearby chains

Chain 3
39S ribosomal protein L35, mitochondrial
Chain 6
39S ribosomal protein L38, mitochondrial
Chain XM
39S ribosomal protein L15, mitochondrial
Chain g
39S ribosomal protein L49, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:


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