IL_6ZSC_090

3D structure

PDB id

6ZSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCU*AACA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZSC_090 not in the Motif Atlas

Geometric match to IL_4P3T_002

Geometric discrepancy: 0.3064

The information below is about IL_4P3T_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01472.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

5

Unit IDs

6ZSC|1|XA|U|2953
6ZSC|1|XA|C|2954
6ZSC|1|XA|U|2955
*
6ZSC|1|XA|A|2968
6ZSC|1|XA|A|2969
6ZSC|1|XA|C|2970
6ZSC|1|XA|A|2971

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 4

39S ribosomal protein L36, mitochondrial

Chain XN

39S ribosomal protein L16, mitochondrial

Chain l

39S ribosomal protein L54, mitochondrial