IL_6ZSE_023

3D structure

PDB id

6ZSE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

AAACU*ACUAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZSE_023 not in the Motif Atlas

Homologous match to IL_4LFB_033

Geometric discrepancy: 0.2043

The information below is about IL_4LFB_033

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_05821.1

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

17

Unit IDs

6ZSE|1|AA|A|1067
6ZSE|1|AA|A|1068
6ZSE|1|AA|A|1069
6ZSE|1|AA|C|1070
6ZSE|1|AA|U|1071
*
6ZSE|1|AA|A|1087
6ZSE|1|AA|C|1088
6ZSE|1|AA|U|1089
6ZSE|1|AA|A|1090
6ZSE|1|AA|U|1091

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AI

28S ribosomal protein S11, mitochondrial

Chain AQ

28S ribosomal protein S21, mitochondrial

Chain XA

Large subunit ribosomal RNA; LSU rRNA