IL_6ZSE_043
3D structure
- PDB id
- 6ZSE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- CAAGU*AUAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZSE_043 not in the Motif Atlas
- Homologous match to IL_6CZR_169
- Geometric discrepancy: 0.5047
- The information below is about IL_6CZR_169
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.14
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 36
Unit IDs
6ZSE|1|AA|C|1500
6ZSE|1|AA|A|1501
6ZSE|1|AA|A|1502
6ZSE|1|AA|G|1503
6ZSE|1|AA|U|1504
*
6ZSE|1|AA|A|1546
6ZSE|1|AA|U|1547
6ZSE|1|AA|A|1548
6ZSE|1|AA|G|1549
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain A3
- Aurora kinase A-interacting protein
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain XA
- Large subunit ribosomal RNA; LSU rRNA
- Chain XL
- 39S ribosomal protein L14, mitochondrial
Coloring options: