IL_6ZSE_060
3D structure
- PDB id
- 6ZSE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- GAG*CUACC
- Length
- 8 nucleotides
- Bulged bases
- 6ZSE|1|XA|A|1986, 6ZSE|1|XA|U|1998, 6ZSE|1|XA|A|1999, 6ZSE|1|XA|C|2000
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZSE_060 not in the Motif Atlas
- Homologous match to IL_5J7L_265
- Geometric discrepancy: 0.148
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6ZSE|1|XA|G|1985
6ZSE|1|XA|A|1986
6ZSE|1|XA|G|1987
*
6ZSE|1|XA|C|1997
6ZSE|1|XA|U|1998
6ZSE|1|XA|A|1999
6ZSE|1|XA|C|2000
6ZSE|1|XA|C|2001
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain XD
- 39S ribosomal protein L2, mitochondrial
- Chain XF
- 39S ribosomal protein L4, mitochondrial
- Chain XT
- 39S ribosomal protein L22, mitochondrial
Coloring options: