IL_6ZSG_083

3D structure

PDB id

6ZSG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UAU*AA

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZSG_083 not in the Motif Atlas

Geometric match to IL_7A0S_003

Geometric discrepancy: 0.2431

The information below is about IL_7A0S_003

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

68

Unit IDs

6ZSG|1|XA|U|2744
6ZSG|1|XA|A|2745
6ZSG|1|XA|U|2746
*
6ZSG|1|XA|A|2802
6ZSG|1|XA|A|2803

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XX

39S ribosomal protein L28, mitochondrial