3D structure

PDB id
6ZTL (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in collided state bound to NusG
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GCACU*AAAC
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ZTL_092 not in the Motif Atlas
Homologous match to IL_5J7L_272
Geometric discrepancy: 0.1187
The information below is about IL_5J7L_272
Detailed Annotation
C-loop
Broad Annotation
No text annotation
Motif group
IL_26222.2
Basepair signature
cWW-cWS-cSH-tWH-R-L-R-cWW
Number of instances in this motif group
6

Unit IDs

6ZTL|1|BA|G|864
6ZTL|1|BA|C|865
6ZTL|1|BA|A|866
6ZTL|1|BA|C|867
6ZTL|1|BA|U|868
*
6ZTL|1|BA|A|909
6ZTL|1|BA|A|910
6ZTL|1|BA|A|911
6ZTL|1|BA|C|912

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BB
5S ribosomal RNA; 5S rRNA
Chain BN
50S ribosomal protein L16

Coloring options:


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