IL_6ZTL_113

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTL_113 not in the Motif Atlas

Homologous match to IL_5J7L_292

Geometric discrepancy: 0.1154

The information below is about IL_5J7L_292

Detailed Annotation

UAA/GAN

Broad Annotation

UAA/GAN

Motif group

IL_89021.2

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

6

Unit IDs

6ZTL|1|BA|C|1351
6ZTL|1|BA|U|1352
6ZTL|1|BA|A|1353
6ZTL|1|BA|A|1354
6ZTL|1|BA|G|1355
*
6ZTL|1|BA|C|1376
6ZTL|1|BA|G|1377
6ZTL|1|BA|A|1378
6ZTL|1|BA|U|1379
6ZTL|1|BA|G|1380

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L34

Chain BC

50S ribosomal protein L2