IL_6ZTL_131

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGAGG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTL_131 not in the Motif Atlas

Homologous match to IL_5J7L_310

Geometric discrepancy: 0.1682

The information below is about IL_5J7L_310

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

6ZTL|1|BA|U|1720
6ZTL|1|BA|G|1721
6ZTL|1|BA|A|1722
6ZTL|1|BA|G|1723
6ZTL|1|BA|G|1724
*
6ZTL|1|BA|U|1736
6ZTL|1|BA|G|1737
6ZTL|1|BA|G|1738
6ZTL|1|BA|A|1739
6ZTL|1|BA|G|1740

Current chains

Chain BA

23S ribosomal RNA

Nearby chains