3D structure

PDB id
6ZTL (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in collided state bound to NusG
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
AAU*AGGUU
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ZTL_154 not in the Motif Atlas
Geometric match to IL_5J7L_332
Geometric discrepancy: 0.2339
The information below is about IL_5J7L_332
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_61476.2
Basepair signature
cWW-tSH-L-cWW-L
Number of instances in this motif group
7

Unit IDs

6ZTL|1|BA|A|2297
6ZTL|1|BA|A|2298
6ZTL|1|BA|U|2299
*
6ZTL|1|BA|A|2317
6ZTL|1|BA|G|2318
6ZTL|1|BA|G|2319
6ZTL|1|BA|U|2320
6ZTL|1|BA|U|2321

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BB
5S ribosomal RNA; 5S rRNA
Chain BF
50S ribosomal protein L5
Chain BX
50S ribosomal protein L27

Coloring options:


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