IL_6ZTL_167

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUGAG*CGAGAUGAG

Length

14 nucleotides

Bulged bases

6ZTL|1|BA|G|2780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTL_167 not in the Motif Atlas

Homologous match to IL_7RQB_102

Geometric discrepancy: 0.1101

The information below is about IL_7RQB_102

Detailed Annotation

tSH-tHS-tHW

Broad Annotation

tSH-tHS-tHW

Motif group

IL_04638.1

Basepair signature

cWW-tSH-tHW-tHS-cSH-cWW-L

Number of instances in this motif group

5

Unit IDs

6ZTL|1|BA|C|2636
6ZTL|1|BA|U|2637
6ZTL|1|BA|G|2638
6ZTL|1|BA|A|2639
6ZTL|1|BA|G|2640
*
6ZTL|1|BA|C|2774
6ZTL|1|BA|G|2775
6ZTL|1|BA|A|2776
6ZTL|1|BA|G|2777
6ZTL|1|BA|A|2778
6ZTL|1|BA|U|2779
6ZTL|1|BA|G|2780
6ZTL|1|BA|A|2781
6ZTL|1|BA|G|2782

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BD

50S ribosomal protein L3

Chain BK

50S ribosomal protein L13