IL_6ZTL_194

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTL_194 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1037

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

6ZTL|1|BA|U|1851
6ZTL|1|BA|U|1852
6ZTL|1|BA|A|1853
6ZTL|1|BA|A|1854
6ZTL|1|BA|U|1855
6ZTL|1|BA|U|1856
6ZTL|1|BA|G|1857
6ZTL|1|BA|A|1858
6ZTL|1|BA|U|1859
6ZTL|1|BA|G|1860
*
6ZTL|1|BA|U|1882
6ZTL|1|BA|U|1883
6ZTL|1|BA|G|1884
6ZTL|1|BA|A|1885
6ZTL|1|BA|U|1886
6ZTL|1|BA|C|1887
6ZTL|1|BA|G|1888
6ZTL|1|BA|A|1889
6ZTL|1|BA|A|1890
6ZTL|1|BA|G|1891

Current chains

Chain BA

23S ribosomal RNA

Nearby chains