IL_6ZTM_105

3D structure

PDB id

6ZTM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state without NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUUG*CAUC

Length

8 nucleotides

Bulged bases

6ZTM|1|BA|U|1061, 6ZTM|1|BA|U|1078

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTM_105 not in the Motif Atlas

Homologous match to IL_5J7L_285

Geometric discrepancy: 0.4433

The information below is about IL_5J7L_285

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92446.2

Basepair signature

cWW-cWW-R-L-L

Number of instances in this motif group

5

Unit IDs

6ZTM|1|BA|G|1059
6ZTM|1|BA|U|1060
6ZTM|1|BA|U|1061
6ZTM|1|BA|G|1062
*
6ZTM|1|BA|C|1076
6ZTM|1|BA|A|1077
6ZTM|1|BA|U|1078
6ZTM|1|BA|C|1079

Current chains

Chain BA

23S ribosomal RNA

Nearby chains