IL_6ZTM_112

3D structure

PDB id

6ZTM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state without NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCAAC*GGG

Length

8 nucleotides

Bulged bases

6ZTM|1|BA|G|1332

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTM_112 not in the Motif Atlas

Homologous match to IL_5J7L_291

Geometric discrepancy: 0.1217

The information below is about IL_5J7L_291

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.11

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

19

Unit IDs

6ZTM|1|BA|C|1319
6ZTM|1|BA|C|1320
6ZTM|1|BA|A|1321
6ZTM|1|BA|A|1322
6ZTM|1|BA|C|1323
*
6ZTM|1|BA|G|1331
6ZTM|1|BA|G|1332
6ZTM|1|BA|G|1333

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BT

50S ribosomal protein L22