IL_6ZTM_144

3D structure

PDB id

6ZTM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state without NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GU(G7M)A*UCC

Length

7 nucleotides

Bulged bases

6ZTM|1|BA|U|2068

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTM_144 not in the Motif Atlas

Geometric match to IL_5C5W_002

Geometric discrepancy: 0.1347

The information below is about IL_5C5W_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

6ZTM|1|BA|G|2067
6ZTM|1|BA|U|2068
6ZTM|1|BA|G7M|2069
6ZTM|1|BA|A|2070
*
6ZTM|1|BA|U|2441
6ZTM|1|BA|C|2442
6ZTM|1|BA|C|2443

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein L4

Chain BM

50S ribosomal protein L15