IL_6ZTN_046
3D structure
- PDB id
- 6ZTN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCUGCAU*AUG(2MG)C
- Length
- 12 nucleotides
- Bulged bases
- 6ZTN|1|AA|C|1054
- QA status
- Modified nucleotides: 2MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZTN_046 not in the Motif Atlas
- Geometric match to IL_4V88_422
- Geometric discrepancy: 0.3938
- The information below is about IL_4V88_422
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
6ZTN|1|AA|G|1050
6ZTN|1|AA|C|1051
6ZTN|1|AA|U|1052
6ZTN|1|AA|G|1053
6ZTN|1|AA|C|1054
6ZTN|1|AA|A|1055
6ZTN|1|AA|U|1056
*
6ZTN|1|AA|A|1204
6ZTN|1|AA|U|1205
6ZTN|1|AA|G|1206
6ZTN|1|AA|2MG|1207
6ZTN|1|AA|C|1208
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AC
- 30S ribosomal protein S3
- Chain AJ
- 30S ribosomal protein S10
- Chain AN
- 30S ribosomal protein S14
- Chain AV
- mRNA
- Chain AX
- Transfer RNA; tRNA
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