IL_6ZTN_118

3D structure

PDB id

6ZTN (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

6ZTN|1|BA|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTN_118 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.0898

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

6ZTN|1|BA|C|1437
6ZTN|1|BA|U|1438
6ZTN|1|BA|A|1439
6ZTN|1|BA|U|1440
*
6ZTN|1|BA|A|1551
6ZTN|1|BA|A|1552
6ZTN|1|BA|A|1553
6ZTN|1|BA|U|1554
6ZTN|1|BA|G|1555

Current chains

Chain BA

23S ribosomal RNA

Nearby chains