IL_6ZTN_124

3D structure

PDB id

6ZTN (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGAG*UGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTN_124 not in the Motif Atlas

Homologous match to IL_5J7L_303

Geometric discrepancy: 0.1501

The information below is about IL_5J7L_303

Detailed Annotation

UAA/GAN variation

Broad Annotation

UAA/GAN variation

Motif group

IL_23774.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

11

Unit IDs

6ZTN|1|BA|C|1526
6ZTN|1|BA|G|1527
6ZTN|1|BA|A|1528
6ZTN|1|BA|G|1529
*
6ZTN|1|BA|U|1542
6ZTN|1|BA|G|1543
6ZTN|1|BA|A|1544
6ZTN|1|BA|A|1545
6ZTN|1|BA|G|1546

Current chains

Chain BA

23S ribosomal RNA

Nearby chains