IL_6ZTN_172

3D structure

PDB id

6ZTN (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAUAAG*CGAAAC

Length

12 nucleotides

Bulged bases

6ZTN|1|BA|A|2765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTN_172 not in the Motif Atlas

Homologous match to IL_5J7L_350

Geometric discrepancy: 0.0802

The information below is about IL_5J7L_350

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.8

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

6

Unit IDs

6ZTN|1|BA|G|2737
6ZTN|1|BA|A|2738
6ZTN|1|BA|U|2739
6ZTN|1|BA|A|2740
6ZTN|1|BA|A|2741
6ZTN|1|BA|G|2742
*
6ZTN|1|BA|C|2762
6ZTN|1|BA|G|2763
6ZTN|1|BA|A|2764
6ZTN|1|BA|A|2765
6ZTN|1|BA|A|2766
6ZTN|1|BA|C|2767

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B6

50S ribosomal protein L36

Chain BG

50S ribosomal protein L6

Chain BK

50S ribosomal protein L13