3D structure

PDB id
6ZTO (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GG*UCAUC
Length
7 nucleotides
Bulged bases
6ZTO|1|AA|C|1200, 6ZTO|1|AA|A|1201
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ZTO_048 not in the Motif Atlas
Homologous match to IL_5J7L_048
Geometric discrepancy: 0.0753
The information below is about IL_5J7L_048
Detailed Annotation
Minor groove platform
Broad Annotation
No text annotation
Motif group
IL_95583.2
Basepair signature
cWW-L-cWW
Number of instances in this motif group
11

Unit IDs

6ZTO|1|AA|G|1057
6ZTO|1|AA|G|1058
*
6ZTO|1|AA|U|1199
6ZTO|1|AA|C|1200
6ZTO|1|AA|A|1201
6ZTO|1|AA|U|1202
6ZTO|1|AA|C|1203

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AC
30S ribosomal protein S3
Chain AJ
30S ribosomal protein S10
Chain AN
30S ribosomal protein S14

Coloring options:


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