3D structure

PDB id
6ZTO (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CCCAGACAG*UCGAG
Length
14 nucleotides
Bulged bases
6ZTO|1|BA|A|1046
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ZTO_104 not in the Motif Atlas
Homologous match to IL_5J7L_284
Geometric discrepancy: 0.1221
The information below is about IL_5J7L_284
Detailed Annotation
Kink-turn
Broad Annotation
No text annotation
Motif group
IL_99692.2
Basepair signature
cWW-tSS-tSH-L-R-R-L-cWW-L-L
Number of instances in this motif group
6

Unit IDs

6ZTO|1|BA|C|1043
6ZTO|1|BA|C|1044
6ZTO|1|BA|C|1045
6ZTO|1|BA|A|1046
6ZTO|1|BA|G|1047
6ZTO|1|BA|A|1048
6ZTO|1|BA|C|1049
6ZTO|1|BA|A|1050
6ZTO|1|BA|G|1051
*
6ZTO|1|BA|U|1108
6ZTO|1|BA|C|1109
6ZTO|1|BA|G|1110
6ZTO|1|BA|A|1111
6ZTO|1|BA|G|1112

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B6
50S ribosomal protein L36
Chain BG
50S ribosomal protein L6

Coloring options:


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