3D structure

PDB id
6ZTO (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
UGUAG*UGAGG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6ZTO_121 not in the Motif Atlas
Homologous match to IL_5J7L_300
Geometric discrepancy: 0.0887
The information below is about IL_5J7L_300
Detailed Annotation
tSH-tHW-tHS
Broad Annotation
No text annotation
Motif group
IL_38862.4
Basepair signature
cWW-cSH-R-tWH-tHS-cWW
Number of instances in this motif group
5

Unit IDs

6ZTO|1|BA|U|1474
6ZTO|1|BA|G|1475
6ZTO|1|BA|U|1476
6ZTO|1|BA|A|1477
6ZTO|1|BA|G|1478
*
6ZTO|1|BA|U|1513
6ZTO|1|BA|G|1514
6ZTO|1|BA|A|1515
6ZTO|1|BA|G|1516
6ZTO|1|BA|G|1517

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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