IL_6ZTO_166

3D structure

PDB id

6ZTO (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAC*G(PSU)(PSU)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTO_166 not in the Motif Atlas

Geometric match to IL_6AZ4_001

Geometric discrepancy: 0.3513

The information below is about IL_6AZ4_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69145.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

5

Unit IDs

6ZTO|1|BA|G|2588
6ZTO|1|BA|A|2589
6ZTO|1|BA|A|2590
6ZTO|1|BA|C|2591
*
6ZTO|1|BA|G|2603
6ZTO|1|BA|PSU|2604
6ZTO|1|BA|PSU|2605
6ZTO|1|BA|C|2606

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AW

Transfer RNA; tRNA

Chain BC

50S ribosomal protein L2