IL_6ZTP_023

3D structure

PDB id

6ZTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 6

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAGGG*CAUUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTP_023 not in the Motif Atlas

Homologous match to IL_5J7L_023

Geometric discrepancy: 0.0879

The information below is about IL_5J7L_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70801.1

Basepair signature

cWW-cWW-L-R-tWW-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

6ZTP|1|AA|G|450
6ZTP|1|AA|A|451
6ZTP|1|AA|A|452
6ZTP|1|AA|G|453
6ZTP|1|AA|G|454
6ZTP|1|AA|G|455
*
6ZTP|1|AA|C|477
6ZTP|1|AA|A|478
6ZTP|1|AA|U|479
6ZTP|1|AA|U|480
6ZTP|1|AA|G|481
6ZTP|1|AA|A|482
6ZTP|1|AA|C|483

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AP

30S ribosomal protein S16