IL_6ZTP_058

3D structure

PDB id

6ZTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 6

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

6ZTP|1|AA|C|1400, 6ZTP|1|AA|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTP_058 not in the Motif Atlas

Homologous match to IL_5J7L_058

Geometric discrepancy: 0.0718

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

6ZTP|1|AA|C|1399
6ZTP|1|AA|C|1400
6ZTP|1|AA|G|1401
*
6ZTP|1|AA|C|1501
6ZTP|1|AA|A|1502
6ZTP|1|AA|A|1503
6ZTP|1|AA|G|1504

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AE

30S ribosomal protein S5

Chain AV

mRNA

Chain AW

Transfer RNA; tRNA