IL_6ZTP_190

3D structure

PDB id

6ZTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 6

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZTP_190 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.0555

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

6ZTP|1|BA|U|1851
6ZTP|1|BA|U|1852
6ZTP|1|BA|A|1853
6ZTP|1|BA|A|1854
6ZTP|1|BA|U|1855
6ZTP|1|BA|U|1856
6ZTP|1|BA|G|1857
6ZTP|1|BA|A|1858
6ZTP|1|BA|U|1859
6ZTP|1|BA|G|1860
*
6ZTP|1|BA|U|1882
6ZTP|1|BA|U|1883
6ZTP|1|BA|G|1884
6ZTP|1|BA|A|1885
6ZTP|1|BA|U|1886
6ZTP|1|BA|C|1887
6ZTP|1|BA|G|1888
6ZTP|1|BA|A|1889
6ZTP|1|BA|A|1890
6ZTP|1|BA|G|1891

Current chains

Chain BA

23S ribosomal RNA

Nearby chains