IL_6ZU5_005

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CC*GCG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_005 not in the Motif Atlas

Homologous match to IL_5TBW_004

Geometric discrepancy: 0.2111

The information below is about IL_5TBW_004

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_05035.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

38

Unit IDs

6ZU5|1|L50|C|121
6ZU5|1|L50|C|122
*
6ZU5|1|L50|G|150
6ZU5|1|L50|C|151
6ZU5|1|L50|G|152

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LHH

uL29

Chain LJJ

eL37

Chain LL0

eL13

Chain LN0

eL15