IL_6ZU5_006
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGGACUU*AUCACUAG
- Length
- 15 nucleotides
- Bulged bases
- 6ZU5|1|L50|C|143
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZU5_006 not in the Motif Atlas
- Geometric match to IL_4V9F_006
- Geometric discrepancy: 0.1977
- The information below is about IL_4V9F_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.3
- Basepair signature
- cWW-cWW-tSH-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
6ZU5|1|L50|C|126
6ZU5|1|L50|G|127
6ZU5|1|L50|G|128
6ZU5|1|L50|A|129
6ZU5|1|L50|C|130
6ZU5|1|L50|U|131
6ZU5|1|L50|U|132
*
6ZU5|1|L50|A|139
6ZU5|1|L50|U|140
6ZU5|1|L50|C|141
6ZU5|1|L50|A|142
6ZU5|1|L50|C|143
6ZU5|1|L50|U|144
6ZU5|1|L50|A|145
6ZU5|1|L50|G|146
Current chains
- Chain L50
- 25S rRNA
Nearby chains
- Chain LAA
- uL15
- Chain LJJ
- eL37
- Chain LL0
- eL13
- Chain LN0
- eL15
- Chain LOO
- eL42
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