IL_6ZU5_008

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AU*AGUUGU

Length

8 nucleotides

Bulged bases

6ZU5|1|L50|U|232

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6ZU5_008 not in the Motif Atlas

Homologous match to IL_5TBW_007

Geometric discrepancy: 0.0673

The information below is about IL_5TBW_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_19724.3

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

6ZU5|1|L50|A|216
6ZU5|1|L50|U|217
*
6ZU5|1|L50|A|229
6ZU5|1|L50|G|230
6ZU5|1|L50|U|231
6ZU5|1|L50|U|232
6ZU5|1|L50|G|233
6ZU5|1|L50|U|234

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LG0

eL8

Chain LN0

eL15